Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.77□□□□□ -0.37
Ctdsp1P58466 Gm43137-201ENSMUST00000198052 594 ntBASIC12.77□□□□□ -0.37
Ctdsp1P58466 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.77□□□□□ -0.37
Ctdsp1P58466 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ctdsp1P58466 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ctdsp1P58466 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.76□□□□□ -0.37
Ctdsp1P58466 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ctdsp1P58466 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.76□□□□□ -0.37
Ctdsp1P58466 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ctdsp1P58466 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ctdsp1P58466 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms