Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.19■□□□□ 0.66
Irf5P56477 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Irf5P56477 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Irf5P56477 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.18■□□□□ 0.66
Irf5P56477 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Rps4l-201ENSMUST00000071745 943 ntBASIC19.18■□□□□ 0.66
Irf5P56477 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Irf5P56477 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Irf5P56477 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Irf5P56477 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.17■□□□□ 0.66
Irf5P56477 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.17■□□□□ 0.66
Irf5P56477 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Gm18421-201ENSMUST00000204122 625 ntBASIC19.17■□□□□ 0.66
Irf5P56477 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.17■□□□□ 0.66
Irf5P56477 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.17■□□□□ 0.66
Irf5P56477 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Irf5P56477 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Irf5P56477 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.17■□□□□ 0.66
Irf5P56477 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Irf5P56477 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Irf5P56477 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.16■□□□□ 0.66
Irf5P56477 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Irf5P56477 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Irf5P56477 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.16■□□□□ 0.66
Irf5P56477 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Gm2651-201ENSMUST00000203560 838 ntBASIC19.16■□□□□ 0.66
Irf5P56477 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.16■□□□□ 0.66
Irf5P56477 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Irf5P56477 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Irf5P56477 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Irf5P56477 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Irf5P56477 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.15■□□□□ 0.66
Irf5P56477 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Irf5P56477 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.15■□□□□ 0.66
Irf5P56477 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.15■□□□□ 0.66
Irf5P56477 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Irf5P56477 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Irf5P56477 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Irf5P56477 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms