Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.56□□□□□ -0.08
Abcd3P55096 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abcd3P55096 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Abcd3P55096 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.55□□□□□ -0.08
Abcd3P55096 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Abcd3P55096 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.55□□□□□ -0.08
Abcd3P55096 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Gm9987-201ENSMUST00000069768 567 ntBASIC14.55□□□□□ -0.08
Abcd3P55096 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Abcd3P55096 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abcd3P55096 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Abcd3P55096 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.54□□□□□ -0.08
Abcd3P55096 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.54□□□□□ -0.08
Abcd3P55096 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Abcd3P55096 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.54□□□□□ -0.08
Abcd3P55096 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.54□□□□□ -0.08
Abcd3P55096 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Abcd3P55096 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abcd3P55096 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Abcd3P55096 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.53□□□□□ -0.08
Abcd3P55096 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.53□□□□□ -0.08
Abcd3P55096 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Abcd3P55096 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Abcd3P55096 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Abcd3P55096 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Abcd3P55096 Gm10013-201ENSMUST00000106074 672 ntBASIC14.53□□□□□ -0.08
Abcd3P55096 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.53□□□□□ -0.08
Abcd3P55096 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.53□□□□□ -0.08
Abcd3P55096 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.53□□□□□ -0.08
Abcd3P55096 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Abcd3P55096 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Abcd3P55096 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.52□□□□□ -0.08
Abcd3P55096 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd3P55096 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd3P55096 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd3P55096 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms