Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.52■□□□□ 0.88
Msh6P54276 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Gm7222-201ENSMUST00000117512 906 ntBASIC20.52■□□□□ 0.88
Msh6P54276 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Msh6P54276 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Msh6P54276 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Msh6P54276 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Msh6P54276 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Msh6P54276 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh6P54276 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Msh6P54276 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.51■□□□□ 0.87
Msh6P54276 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh6P54276 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Msh6P54276 Gm25406-201ENSMUST00000157599 105 ntBASIC20.51■□□□□ 0.87
Msh6P54276 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Msh6P54276 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Msh6P54276 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Msh6P54276 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Msh6P54276 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.5■□□□□ 0.87
Msh6P54276 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Msh6P54276 Gm9172-201ENSMUST00000212092 954 ntBASIC20.5■□□□□ 0.87
Msh6P54276 Gm8655-201ENSMUST00000221159 852 ntBASIC20.5■□□□□ 0.87
Msh6P54276 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.5■□□□□ 0.87
Msh6P54276 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Msh6P54276 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.5■□□□□ 0.87
Msh6P54276 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Msh6P54276 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Msh6P54276 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
Msh6P54276 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.49■□□□□ 0.87
Msh6P54276 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.49■□□□□ 0.87
Msh6P54276 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.49■□□□□ 0.87
Msh6P54276 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh6P54276 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Msh6P54276 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.48■□□□□ 0.87
Msh6P54276 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.48■□□□□ 0.87
Msh6P54276 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Msh6P54276 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.48■□□□□ 0.87
Msh6P54276 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh6P54276 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.47■□□□□ 0.87
Msh6P54276 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Msh6P54276 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Msh6P54276 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Msh6P54276 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Msh6P54276 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Msh6P54276 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.47■□□□□ 0.87
Msh6P54276 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.47■□□□□ 0.87
Msh6P54276 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Msh6P54276 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh6P54276 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.46■□□□□ 0.87
Msh6P54276 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.46■□□□□ 0.87
Msh6P54276 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Msh6P54276 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms