Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SftpbP50405 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SftpbP50405 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SftpbP50405 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SftpbP50405 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SftpbP50405 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SftpbP50405 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.64■□□□□ 0.25
SftpbP50405 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.64■□□□□ 0.25
SftpbP50405 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SftpbP50405 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SftpbP50405 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SftpbP50405 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
SftpbP50405 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.63■□□□□ 0.25
SftpbP50405 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SftpbP50405 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SftpbP50405 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.63■□□□□ 0.25
SftpbP50405 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.63■□□□□ 0.25
SftpbP50405 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SftpbP50405 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.62■□□□□ 0.25
SftpbP50405 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SftpbP50405 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SftpbP50405 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SftpbP50405 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SftpbP50405 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
SftpbP50405 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Gm27011-201ENSMUST00000182352 972 ntBASIC16.62■□□□□ 0.25
SftpbP50405 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.62■□□□□ 0.25
SftpbP50405 Gm5417-201ENSMUST00000079706 384 ntBASIC16.62■□□□□ 0.25
SftpbP50405 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SftpbP50405 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.62■□□□□ 0.25
SftpbP50405 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SftpbP50405 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SftpbP50405 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SftpbP50405 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.61■□□□□ 0.25
SftpbP50405 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SftpbP50405 Gm11539-201ENSMUST00000119837 557 ntBASIC16.61■□□□□ 0.25
SftpbP50405 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SftpbP50405 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.61■□□□□ 0.25
SftpbP50405 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms