Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccl11P48298 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccl11P48298 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.73□□□□□ -0.21
Ccl11P48298 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccl11P48298 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccl11P48298 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccl11P48298 Gm36967-201ENSMUST00000193814 266 ntBASIC13.73□□□□□ -0.21
Ccl11P48298 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccl11P48298 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccl11P48298 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccl11P48298 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccl11P48298 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Gm25745-201ENSMUST00000174945 133 ntBASIC13.72□□□□□ -0.21
Ccl11P48298 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccl11P48298 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccl11P48298 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccl11P48298 Gm44771-201ENSMUST00000206975 626 ntBASIC13.72□□□□□ -0.21
Ccl11P48298 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.72□□□□□ -0.21
Ccl11P48298 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccl11P48298 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccl11P48298 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccl11P48298 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccl11P48298 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccl11P48298 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccl11P48298 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.71□□□□□ -0.21
Ccl11P48298 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccl11P48298 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccl11P48298 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccl11P48298 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Ccl11P48298 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccl11P48298 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccl11P48298 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl11P48298 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl11P48298 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccl11P48298 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms