Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Xcl1P47993 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC10.63□□□□□ -0.71
Xcl1P47993 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC10.63□□□□□ -0.71
Xcl1P47993 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Xcl1P47993 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Xcl1P47993 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Xcl1P47993 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.63□□□□□ -0.71
Xcl1P47993 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Xcl1P47993 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Xcl1P47993 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Xcl1P47993 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.62□□□□□ -0.71
Xcl1P47993 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Gm10418-201ENSMUST00000100943 576 ntBASIC10.62□□□□□ -0.71
Xcl1P47993 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.62□□□□□ -0.71
Xcl1P47993 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.62□□□□□ -0.71
Xcl1P47993 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Xcl1P47993 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Xcl1P47993 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC10.61□□□□□ -0.71
Xcl1P47993 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC10.61□□□□□ -0.71
Xcl1P47993 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Xcl1P47993 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Xcl1P47993 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.61□□□□□ -0.71
Xcl1P47993 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.61□□□□□ -0.71
Xcl1P47993 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Xcl1P47993 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Xcl1P47993 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms