Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.68■□□□□ 0.1
Rph3aP47708 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.68■□□□□ 0.1
Rph3aP47708 Gm25016-201ENSMUST00000158399 131 ntBASIC15.68■□□□□ 0.1
Rph3aP47708 Gm23634-201ENSMUST00000175071 91 ntBASIC15.68■□□□□ 0.1
Rph3aP47708 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.68■□□□□ 0.1
Rph3aP47708 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.68■□□□□ 0.1
Rph3aP47708 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rph3aP47708 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rph3aP47708 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rph3aP47708 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Rph3aP47708 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.67■□□□□ 0.1
Rph3aP47708 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.67■□□□□ 0.1
Rph3aP47708 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.67■□□□□ 0.1
Rph3aP47708 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rph3aP47708 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rph3aP47708 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Rph3aP47708 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rph3aP47708 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.66■□□□□ 0.1
Rph3aP47708 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rph3aP47708 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.66■□□□□ 0.1
Rph3aP47708 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rph3aP47708 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rph3aP47708 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rph3aP47708 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rph3aP47708 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 AA414768-201ENSMUST00000121924 1257 ntBASIC15.65■□□□□ 0.1
Rph3aP47708 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.65■□□□□ 0.1
Rph3aP47708 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.65■□□□□ 0.1
Rph3aP47708 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rph3aP47708 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rph3aP47708 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rph3aP47708 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.65■□□□□ 0.1
Rph3aP47708 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rph3aP47708 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Rph3aP47708 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rph3aP47708 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms