Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.28■□□□□ 0.36
HttP42859 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.28■□□□□ 0.36
HttP42859 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Rpph1-201ENSMUST00000175096 319 ntBASIC17.28■□□□□ 0.36
HttP42859 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.28■□□□□ 0.36
HttP42859 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.28■□□□□ 0.36
HttP42859 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.28■□□□□ 0.36
HttP42859 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HttP42859 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HttP42859 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HttP42859 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HttP42859 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.27■□□□□ 0.36
HttP42859 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HttP42859 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
HttP42859 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.27■□□□□ 0.36
HttP42859 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.27■□□□□ 0.36
HttP42859 Gm12490-201ENSMUST00000120255 560 ntBASIC17.27■□□□□ 0.36
HttP42859 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HttP42859 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HttP42859 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.27■□□□□ 0.36
HttP42859 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.27■□□□□ 0.36
HttP42859 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.27■□□□□ 0.36
HttP42859 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HttP42859 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HttP42859 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HttP42859 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HttP42859 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.27■□□□□ 0.35
HttP42859 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HttP42859 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HttP42859 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HttP42859 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HttP42859 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HttP42859 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HttP42859 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HttP42859 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HttP42859 Gm43433-201ENSMUST00000196573 481 ntBASIC17.25■□□□□ 0.35
HttP42859 Gm5779-201ENSMUST00000218467 910 ntBASIC17.25■□□□□ 0.35
HttP42859 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.25■□□□□ 0.35
HttP42859 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HttP42859 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.25■□□□□ 0.35
HttP42859 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.25■□□□□ 0.35
HttP42859 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HttP42859 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HttP42859 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Gm15487-201ENSMUST00000122373 465 ntBASIC17.24■□□□□ 0.35
HttP42859 Gm18622-201ENSMUST00000219361 595 ntBASIC17.24■□□□□ 0.35
HttP42859 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.24■□□□□ 0.35
HttP42859 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HttP42859 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HttP42859 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.24■□□□□ 0.35
HttP42859 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HttP42859 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gm27618-201ENSMUST00000183671 60 ntBASIC17.23■□□□□ 0.35
HttP42859 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.23■□□□□ 0.35
HttP42859 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
HttP42859 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms