Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cd27P41272 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.02□□□□□ -0.33
Cd27P41272 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd27P41272 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd27P41272 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd27P41272 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cd27P41272 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cd27P41272 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.01□□□□□ -0.33
Cd27P41272 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.01□□□□□ -0.33
Cd27P41272 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd27P41272 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.01□□□□□ -0.33
Cd27P41272 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cd27P41272 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cd27P41272 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cd27P41272 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cd27P41272 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13□□□□□ -0.33
Cd27P41272 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13□□□□□ -0.33
Cd27P41272 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Cd27P41272 Gm27741-201ENSMUST00000185060 237 ntBASIC13□□□□□ -0.33
Cd27P41272 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13□□□□□ -0.33
Cd27P41272 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cd27P41272 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cd27P41272 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Ank2-226ENSMUST00000189368 339 ntBASIC12.99□□□□□ -0.33
Cd27P41272 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC12.99□□□□□ -0.33
Cd27P41272 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.99□□□□□ -0.33
Cd27P41272 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cd27P41272 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd27P41272 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd27P41272 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cd27P41272 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cd27P41272 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cd27P41272 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.98□□□□□ -0.33
Cd27P41272 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cd27P41272 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cd27P41272 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Cd27P41272 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.98□□□□□ -0.33
Cd27P41272 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cd27P41272 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.98□□□□□ -0.33
Cd27P41272 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.98□□□□□ -0.33
Cd27P41272 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms