Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Abca1P41233 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Abca1P41233 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Abca1P41233 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Abca1P41233 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.47□□□□□ -0.25
Abca1P41233 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Mir5131-201ENSMUST00000175426 93 ntBASIC13.47□□□□□ -0.25
Abca1P41233 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.47□□□□□ -0.25
Abca1P41233 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Abca1P41233 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.46□□□□□ -0.25
Abca1P41233 Gm43575-201ENSMUST00000196420 516 ntBASIC13.46□□□□□ -0.25
Abca1P41233 Gm10060-201ENSMUST00000212002 111 ntBASIC13.46□□□□□ -0.25
Abca1P41233 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.46□□□□□ -0.25
Abca1P41233 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.46□□□□□ -0.25
Abca1P41233 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Abca1P41233 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Abca1P41233 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Abca1P41233 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.46□□□□□ -0.25
Abca1P41233 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Abca1P41233 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Abca1P41233 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Abca1P41233 Gm27702-201ENSMUST00000184512 56 ntBASIC13.46□□□□□ -0.26
Abca1P41233 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Abca1P41233 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.46□□□□□ -0.26
Abca1P41233 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Abca1P41233 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Abca1P41233 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Abca1P41233 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Abca1P41233 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.45□□□□□ -0.26
Abca1P41233 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Abca1P41233 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.45□□□□□ -0.26
Abca1P41233 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Abca1P41233 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Abca1P41233 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms