Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.98□□□□□ -0.01
Sftpa1P35242 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sftpa1P35242 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Sftpa1P35242 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.98□□□□□ -0.01
Sftpa1P35242 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sftpa1P35242 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.98□□□□□ -0.01
Sftpa1P35242 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.97□□□□□ -0.01
Sftpa1P35242 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sftpa1P35242 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
Sftpa1P35242 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Sftpa1P35242 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Sftpa1P35242 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.96□□□□□ -0.01
Sftpa1P35242 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.96□□□□□ -0.01
Sftpa1P35242 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.96□□□□□ -0.01
Sftpa1P35242 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.96□□□□□ -0.01
Sftpa1P35242 Chchd1-203ENSMUST00000224633 557 ntBASIC14.96□□□□□ -0.01
Sftpa1P35242 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sftpa1P35242 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sftpa1P35242 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sftpa1P35242 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sftpa1P35242 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sftpa1P35242 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Gm9172-201ENSMUST00000212092 954 ntBASIC14.95□□□□□ -0.02
Sftpa1P35242 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sftpa1P35242 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sftpa1P35242 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sftpa1P35242 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Sftpa1P35242 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sftpa1P35242 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.94□□□□□ -0.02
Sftpa1P35242 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Sftpa1P35242 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.94□□□□□ -0.02
Sftpa1P35242 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.94□□□□□ -0.02
Sftpa1P35242 Gm25406-201ENSMUST00000157599 105 ntBASIC14.94□□□□□ -0.02
Sftpa1P35242 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sftpa1P35242 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Sftpa1P35242 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms