Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Mmp13P33435 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Mmp13P33435 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp13P33435 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Mmp13P33435 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Mmp13P33435 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp13P33435 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Mmp13P33435 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.65■□□□□ 0.26
Mmp13P33435 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
Mmp13P33435 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp13P33435 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Mmp13P33435 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp13P33435 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp13P33435 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Mmp13P33435 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Mmp13P33435 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Mmp13P33435 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Mmp13P33435 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.64■□□□□ 0.26
Mmp13P33435 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
Mmp13P33435 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.64■□□□□ 0.25
Mmp13P33435 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mmp13P33435 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Mmp13P33435 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.64■□□□□ 0.25
Mmp13P33435 Gm18101-201ENSMUST00000215769 548 ntBASIC16.64■□□□□ 0.25
Mmp13P33435 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Mmp13P33435 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mmp13P33435 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Mmp13P33435 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp13P33435 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Gm10013-201ENSMUST00000106074 672 ntBASIC16.63■□□□□ 0.25
Mmp13P33435 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mmp13P33435 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp13P33435 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp13P33435 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.62■□□□□ 0.25
Mmp13P33435 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mmp13P33435 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 Gm22697-201ENSMUST00000175194 63 ntBASIC16.62■□□□□ 0.25
Mmp13P33435 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.62■□□□□ 0.25
Mmp13P33435 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.62■□□□□ 0.25
Mmp13P33435 Gm7370-201ENSMUST00000219471 767 ntBASIC16.62■□□□□ 0.25
Mmp13P33435 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.62■□□□□ 0.25
Mmp13P33435 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp13P33435 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms