Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.02□□□□□ -0.17
Slc6a1P31648 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc6a1P31648 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Gm11249-201ENSMUST00000117071 859 ntBASIC14.01□□□□□ -0.17
Slc6a1P31648 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Gm6576-201ENSMUST00000169678 883 ntBASIC14.01□□□□□ -0.17
Slc6a1P31648 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc6a1P31648 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc6a1P31648 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Nrn1-203ENSMUST00000223611 1443 ntBASIC14□□□□□ -0.17
Slc6a1P31648 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14□□□□□ -0.17
Slc6a1P31648 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Slc6a1P31648 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14□□□□□ -0.17
Slc6a1P31648 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Slc6a1P31648 AC154649.1-201ENSMUST00000227392 384 ntBASIC14□□□□□ -0.17
Slc6a1P31648 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14□□□□□ -0.17
Slc6a1P31648 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Slc6a1P31648 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc6a1P31648 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.99□□□□□ -0.17
Slc6a1P31648 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.99□□□□□ -0.17
Slc6a1P31648 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.99□□□□□ -0.17
Slc6a1P31648 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Slc6a1P31648 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Slc6a1P31648 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms