Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
Nckap1P28660 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.14■□□□□ 0.17
Nckap1P28660 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.14■□□□□ 0.17
Nckap1P28660 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.14■□□□□ 0.17
Nckap1P28660 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Gm6296-201ENSMUST00000222599 943 ntBASIC16.14■□□□□ 0.17
Nckap1P28660 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nckap1P28660 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nckap1P28660 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nckap1P28660 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nckap1P28660 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.13■□□□□ 0.17
Nckap1P28660 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nckap1P28660 Gm7862-201ENSMUST00000121461 292 ntBASIC16.13■□□□□ 0.17
Nckap1P28660 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.13■□□□□ 0.17
Nckap1P28660 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.13■□□□□ 0.17
Nckap1P28660 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nckap1P28660 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.13■□□□□ 0.17
Nckap1P28660 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Nckap1P28660 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nckap1P28660 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nckap1P28660 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.12■□□□□ 0.17
Nckap1P28660 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.12■□□□□ 0.17
Nckap1P28660 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Gm2651-201ENSMUST00000203560 838 ntBASIC16.12■□□□□ 0.17
Nckap1P28660 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nckap1P28660 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nckap1P28660 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.12■□□□□ 0.17
Nckap1P28660 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nckap1P28660 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nckap1P28660 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nckap1P28660 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nckap1P28660 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.11■□□□□ 0.17
Nckap1P28660 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Nckap1P28660 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.11■□□□□ 0.17
Nckap1P28660 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.11■□□□□ 0.17
Nckap1P28660 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nckap1P28660 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nckap1P28660 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nckap1P28660 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nckap1P28660 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nckap1P28660 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Nckap1P28660 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nckap1P28660 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.11■□□□□ 0.17
Nckap1P28660 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.1■□□□□ 0.17
Nckap1P28660 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.1■□□□□ 0.17
Nckap1P28660 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Nckap1P28660 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nckap1P28660 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.1■□□□□ 0.17
Nckap1P28660 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms