Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.19■□□□□ 0.18
Gja4P28235 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Gja4P28235 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gja4P28235 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Gja4P28235 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.19■□□□□ 0.18
Gja4P28235 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.19■□□□□ 0.18
Gja4P28235 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.19■□□□□ 0.18
Gja4P28235 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.19■□□□□ 0.18
Gja4P28235 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.19■□□□□ 0.18
Gja4P28235 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gja4P28235 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gja4P28235 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gja4P28235 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Gm14494-201ENSMUST00000118786 435 ntBASIC16.18■□□□□ 0.18
Gja4P28235 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Gja4P28235 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.18■□□□□ 0.18
Gja4P28235 Gm9727-201ENSMUST00000161387 555 ntBASIC16.18■□□□□ 0.18
Gja4P28235 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.18■□□□□ 0.18
Gja4P28235 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gja4P28235 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.18■□□□□ 0.18
Gja4P28235 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.18■□□□□ 0.18
Gja4P28235 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gja4P28235 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.18■□□□□ 0.18
Gja4P28235 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gja4P28235 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.17■□□□□ 0.18
Gja4P28235 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Gm27702-201ENSMUST00000184512 56 ntBASIC16.17■□□□□ 0.18
Gja4P28235 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.17■□□□□ 0.18
Gja4P28235 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.17■□□□□ 0.18
Gja4P28235 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Gja4P28235 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gja4P28235 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.16■□□□□ 0.18
Gja4P28235 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.16■□□□□ 0.18
Gja4P28235 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.16■□□□□ 0.18
Gja4P28235 Gm18622-201ENSMUST00000219361 595 ntBASIC16.16■□□□□ 0.18
Gja4P28235 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.16■□□□□ 0.18
Gja4P28235 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Gja4P28235 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gja4P28235 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms