Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.06■□□□□ 0.32
H2afxP27661 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H2afxP27661 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Gm7514-201ENSMUST00000209475 934 ntBASIC17.06■□□□□ 0.32
H2afxP27661 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
H2afxP27661 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afxP27661 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H2afxP27661 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H2afxP27661 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.05■□□□□ 0.32
H2afxP27661 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
H2afxP27661 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.05■□□□□ 0.32
H2afxP27661 Gm10138-203ENSMUST00000206952 366 ntBASIC17.05■□□□□ 0.32
H2afxP27661 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.05■□□□□ 0.32
H2afxP27661 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afxP27661 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
H2afxP27661 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.04■□□□□ 0.32
H2afxP27661 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.04■□□□□ 0.32
H2afxP27661 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
H2afxP27661 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afxP27661 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
H2afxP27661 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
H2afxP27661 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.03■□□□□ 0.32
H2afxP27661 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afxP27661 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
H2afxP27661 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.03■□□□□ 0.32
H2afxP27661 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.03■□□□□ 0.32
H2afxP27661 Gm15375-201ENSMUST00000119510 849 ntBASIC17.03■□□□□ 0.32
H2afxP27661 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.03■□□□□ 0.32
H2afxP27661 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.03■□□□□ 0.32
H2afxP27661 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
H2afxP27661 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms