Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.69■□□□□ 0.42
Pde6bP23440 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.69■□□□□ 0.42
Pde6bP23440 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.68■□□□□ 0.42
Pde6bP23440 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.68■□□□□ 0.42
Pde6bP23440 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6bP23440 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pde6bP23440 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6bP23440 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pde6bP23440 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.67■□□□□ 0.42
Pde6bP23440 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pde6bP23440 Gm6296-201ENSMUST00000222599 943 ntBASIC17.67■□□□□ 0.42
Pde6bP23440 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Pde6bP23440 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pde6bP23440 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6bP23440 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6bP23440 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.66■□□□□ 0.42
Pde6bP23440 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pde6bP23440 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.66■□□□□ 0.42
Pde6bP23440 Gm2651-201ENSMUST00000203560 838 ntBASIC17.66■□□□□ 0.42
Pde6bP23440 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.66■□□□□ 0.42
Pde6bP23440 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6bP23440 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.66■□□□□ 0.42
Pde6bP23440 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.65■□□□□ 0.42
Pde6bP23440 Gm7862-201ENSMUST00000121461 292 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms