Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.46□□□□□ -0.09
P20040 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.46□□□□□ -0.09
P20040 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
P20040 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
P20040 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.46□□□□□ -0.09
P20040 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
P20040 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
P20040 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
P20040 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
P20040 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
P20040 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
P20040 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
P20040 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.44□□□□□ -0.1
P20040 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.44□□□□□ -0.1
P20040 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
P20040 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
P20040 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
P20040 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
P20040 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
P20040 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.43□□□□□ -0.1
P20040 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
P20040 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.43□□□□□ -0.1
P20040 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
P20040 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.43□□□□□ -0.1
P20040 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
P20040 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.43□□□□□ -0.1
P20040 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
P20040 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P20040 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.42□□□□□ -0.1
P20040 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P20040 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms