Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.08■□□□□ 0.32
Cd44P15379 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.08■□□□□ 0.32
Cd44P15379 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.08■□□□□ 0.32
Cd44P15379 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cd44P15379 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Cd44P15379 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Cd44P15379 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.07■□□□□ 0.32
Cd44P15379 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.07■□□□□ 0.32
Cd44P15379 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
Cd44P15379 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.07■□□□□ 0.32
Cd44P15379 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.07■□□□□ 0.32
Cd44P15379 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.07■□□□□ 0.32
Cd44P15379 Gm5417-201ENSMUST00000079706 384 ntBASIC17.07■□□□□ 0.32
Cd44P15379 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cd44P15379 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cd44P15379 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.06■□□□□ 0.32
Cd44P15379 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cd44P15379 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.06■□□□□ 0.32
Cd44P15379 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.06■□□□□ 0.32
Cd44P15379 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd44P15379 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cd44P15379 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.06■□□□□ 0.32
Cd44P15379 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Cd44P15379 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cd44P15379 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.06■□□□□ 0.32
Cd44P15379 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cd44P15379 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.05■□□□□ 0.32
Cd44P15379 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cd44P15379 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Gm11336-201ENSMUST00000118168 334 ntBASIC17.05■□□□□ 0.32
Cd44P15379 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cd44P15379 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.05■□□□□ 0.32
Cd44P15379 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cd44P15379 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms