Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Hoxc9P09633 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC21.01■□□□□ 0.95
Hoxc9P09633 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc9P09633 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc9P09633 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.01■□□□□ 0.95
Hoxc9P09633 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc9P09633 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hoxc9P09633 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21■□□□□ 0.95
Hoxc9P09633 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21■□□□□ 0.95
Hoxc9P09633 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21■□□□□ 0.95
Hoxc9P09633 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hoxc9P09633 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hoxc9P09633 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21■□□□□ 0.95
Hoxc9P09633 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Hoxc9P09633 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hoxc9P09633 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.99■□□□□ 0.95
Hoxc9P09633 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.99■□□□□ 0.95
Hoxc9P09633 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxc9P09633 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Hoxc9P09633 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Hoxc9P09633 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.98■□□□□ 0.95
Hoxc9P09633 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.98■□□□□ 0.95
Hoxc9P09633 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxc9P09633 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.97■□□□□ 0.95
Hoxc9P09633 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Hoxc9P09633 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxc9P09633 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.96■□□□□ 0.95
Hoxc9P09633 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxc9P09633 Mir3113-201ENSMUST00000175478 76 ntBASIC20.96■□□□□ 0.95
Hoxc9P09633 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Hoxc9P09633 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms