Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hoxc8P09025 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc8P09025 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc8P09025 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Hoxc8P09025 Gm15358-201ENSMUST00000119249 520 ntBASIC17.27■□□□□ 0.36
Hoxc8P09025 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc8P09025 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc8P09025 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.27■□□□□ 0.36
Hoxc8P09025 Gm27397-201ENSMUST00000184997 107 ntBASIC17.27■□□□□ 0.36
Hoxc8P09025 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.27■□□□□ 0.36
Hoxc8P09025 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.27■□□□□ 0.36
Hoxc8P09025 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.27■□□□□ 0.36
Hoxc8P09025 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc8P09025 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc8P09025 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc8P09025 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hoxc8P09025 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc8P09025 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hoxc8P09025 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Mir3113-201ENSMUST00000175478 76 ntBASIC17.26■□□□□ 0.35
Hoxc8P09025 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc8P09025 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hoxc8P09025 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.25■□□□□ 0.35
Hoxc8P09025 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxc8P09025 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc8P09025 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Gm14822-201ENSMUST00000122247 291 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Gm4899-201ENSMUST00000178708 719 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 Gm27300-201ENSMUST00000184085 97 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 Gm27335-201ENSMUST00000184758 97 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.24■□□□□ 0.35
Hoxc8P09025 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc8P09025 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hoxc8P09025 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Gm45167-201ENSMUST00000208007 322 ntBASIC17.23■□□□□ 0.35
Hoxc8P09025 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.23■□□□□ 0.35
Hoxc8P09025 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hoxc8P09025 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hoxc8P09025 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.22■□□□□ 0.35
Hoxc8P09025 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hoxc8P09025 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms