Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
P04212 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.2□□□□□ -0.3
P04212 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.2□□□□□ -0.3
P04212 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Gm5417-201ENSMUST00000079706 384 ntBASIC13.2□□□□□ -0.3
P04212 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P04212 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
P04212 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P04212 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
P04212 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P04212 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
P04212 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.19□□□□□ -0.3
P04212 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.19□□□□□ -0.3
P04212 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.19□□□□□ -0.3
P04212 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
P04212 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.19□□□□□ -0.3
P04212 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.19□□□□□ -0.3
P04212 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Phf7-203ENSMUST00000226565 1971 ntBASIC13.19□□□□□ -0.3
P04212 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.19□□□□□ -0.3
P04212 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P04212 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P04212 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.18□□□□□ -0.3
P04212 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Gm11539-201ENSMUST00000119837 557 ntBASIC13.18□□□□□ -0.3
P04212 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.18□□□□□ -0.3
P04212 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.18□□□□□ -0.3
P04212 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.18□□□□□ -0.3
P04212 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
P04212 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.18□□□□□ -0.3
P04212 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P04212 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P04212 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.17□□□□□ -0.3
P04212 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
P04212 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P04212 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms