Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CopeO89079 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CopeO89079 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
CopeO89079 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Gm13186-201ENSMUST00000118031 316 ntBASIC16.78■□□□□ 0.28
CopeO89079 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.78■□□□□ 0.28
CopeO89079 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CopeO89079 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CopeO89079 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CopeO89079 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CopeO89079 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CopeO89079 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.77■□□□□ 0.28
CopeO89079 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.77■□□□□ 0.28
CopeO89079 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CopeO89079 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CopeO89079 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.77■□□□□ 0.27
CopeO89079 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CopeO89079 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CopeO89079 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CopeO89079 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CopeO89079 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CopeO89079 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CopeO89079 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.76■□□□□ 0.27
CopeO89079 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.76■□□□□ 0.27
CopeO89079 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.76■□□□□ 0.27
CopeO89079 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CopeO89079 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.76■□□□□ 0.27
CopeO89079 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CopeO89079 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.75■□□□□ 0.27
CopeO89079 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
CopeO89079 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Phf7-203ENSMUST00000226565 1971 ntBASIC16.75■□□□□ 0.27
CopeO89079 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.75■□□□□ 0.27
CopeO89079 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CopeO89079 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CopeO89079 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CopeO89079 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms