Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Birc2-201ENSMUST00000054878 378 ntBASIC14.7□□□□□ -0.06
Lmx1bO88609 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lmx1bO88609 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lmx1bO88609 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Lmx1bO88609 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.69□□□□□ -0.06
Lmx1bO88609 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.69□□□□□ -0.06
Lmx1bO88609 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.69□□□□□ -0.06
Lmx1bO88609 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lmx1bO88609 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.68□□□□□ -0.06
Lmx1bO88609 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Gm10052-201ENSMUST00000168019 960 ntBASIC14.68□□□□□ -0.06
Lmx1bO88609 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.68□□□□□ -0.06
Lmx1bO88609 Gm43347-201ENSMUST00000200226 580 ntBASIC14.68□□□□□ -0.06
Lmx1bO88609 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Gm7729-201ENSMUST00000050143 801 ntBASIC14.68□□□□□ -0.06
Lmx1bO88609 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lmx1bO88609 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lmx1bO88609 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.67□□□□□ -0.06
Lmx1bO88609 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lmx1bO88609 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lmx1bO88609 Gm27459-201ENSMUST00000184860 107 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms