Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.41■□□□□ 0.06
Tgfbr3O88393 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Gm23935-201ENSMUST00000102303 57 ntBASIC15.4■□□□□ 0.06
Tgfbr3O88393 Gm24270-201ENSMUST00000102326 57 ntBASIC15.4■□□□□ 0.06
Tgfbr3O88393 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Gm24245-201ENSMUST00000157318 57 ntBASIC15.4■□□□□ 0.06
Tgfbr3O88393 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tgfbr3O88393 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.39■□□□□ 0.05
Tgfbr3O88393 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.39■□□□□ 0.05
Tgfbr3O88393 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tgfbr3O88393 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.39■□□□□ 0.05
Tgfbr3O88393 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tgfbr3O88393 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.38■□□□□ 0.05
Tgfbr3O88393 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.38■□□□□ 0.05
Tgfbr3O88393 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Gm24513-201ENSMUST00000174964 138 ntBASIC15.38■□□□□ 0.05
Tgfbr3O88393 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.38■□□□□ 0.05
Tgfbr3O88393 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Tgfbr3O88393 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Gm14822-201ENSMUST00000122247 291 ntBASIC15.37■□□□□ 0.05
Tgfbr3O88393 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.37■□□□□ 0.05
Tgfbr3O88393 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Gm27397-201ENSMUST00000184997 107 ntBASIC15.37■□□□□ 0.05
Tgfbr3O88393 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.37■□□□□ 0.05
Tgfbr3O88393 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Tgfbr3O88393 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms