Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnnt1O88346 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnnt1O88346 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnnt1O88346 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnnt1O88346 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tnnt1O88346 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tnnt1O88346 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Gm7506-201ENSMUST00000207758 815 ntBASIC20.72■□□□□ 0.91
Tnnt1O88346 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnnt1O88346 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tnnt1O88346 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.71■□□□□ 0.91
Tnnt1O88346 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.71■□□□□ 0.91
Tnnt1O88346 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.71■□□□□ 0.91
Tnnt1O88346 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Tnnt1O88346 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnnt1O88346 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tnnt1O88346 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tnnt1O88346 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnnt1O88346 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnnt1O88346 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.7■□□□□ 0.9
Tnnt1O88346 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Gm6296-201ENSMUST00000222599 943 ntBASIC20.7■□□□□ 0.9
Tnnt1O88346 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnnt1O88346 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnnt1O88346 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnnt1O88346 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.69■□□□□ 0.9
Tnnt1O88346 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Gm6376-201ENSMUST00000209407 580 ntBASIC20.69■□□□□ 0.9
Tnnt1O88346 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnnt1O88346 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnnt1O88346 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnnt1O88346 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tnnt1O88346 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnnt1O88346 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.68■□□□□ 0.9
Tnnt1O88346 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnnt1O88346 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.67■□□□□ 0.9
Tnnt1O88346 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Gm36967-201ENSMUST00000193814 266 ntBASIC20.67■□□□□ 0.9
Tnnt1O88346 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.67■□□□□ 0.9
Tnnt1O88346 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tnnt1O88346 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnnt1O88346 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnnt1O88346 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms