Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.75□□□□□ -0.05
Pdlim3O70209 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pdlim3O70209 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
Pdlim3O70209 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.75□□□□□ -0.05
Pdlim3O70209 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.75□□□□□ -0.05
Pdlim3O70209 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.75□□□□□ -0.05
Pdlim3O70209 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.75□□□□□ -0.05
Pdlim3O70209 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pdlim3O70209 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.75□□□□□ -0.05
Pdlim3O70209 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pdlim3O70209 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.74□□□□□ -0.05
Pdlim3O70209 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.74□□□□□ -0.05
Pdlim3O70209 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.74□□□□□ -0.05
Pdlim3O70209 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pdlim3O70209 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.74□□□□□ -0.05
Pdlim3O70209 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Pdlim3O70209 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pdlim3O70209 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Pdlim3O70209 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.73□□□□□ -0.05
Pdlim3O70209 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.73□□□□□ -0.05
Pdlim3O70209 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pdlim3O70209 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Gm13186-201ENSMUST00000118031 316 ntBASIC14.72□□□□□ -0.05
Pdlim3O70209 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.72□□□□□ -0.05
Pdlim3O70209 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdlim3O70209 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Pdlim3O70209 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdlim3O70209 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Pdlim3O70209 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim3O70209 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms