Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cldn5O54942 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.84■□□□□ 0.29
Cldn5O54942 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.83■□□□□ 0.29
Cldn5O54942 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.83■□□□□ 0.29
Cldn5O54942 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cldn5O54942 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.83■□□□□ 0.28
Cldn5O54942 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Gm11452-201ENSMUST00000122376 690 ntBASIC16.83■□□□□ 0.28
Cldn5O54942 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Gm25745-201ENSMUST00000174945 133 ntBASIC16.83■□□□□ 0.28
Cldn5O54942 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.83■□□□□ 0.28
Cldn5O54942 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.83■□□□□ 0.28
Cldn5O54942 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldn5O54942 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cldn5O54942 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.82■□□□□ 0.28
Cldn5O54942 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.82■□□□□ 0.28
Cldn5O54942 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cldn5O54942 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldn5O54942 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
Cldn5O54942 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cldn5O54942 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Haglr-201ENSMUST00000100000 2085 ntBASIC16.81■□□□□ 0.28
Cldn5O54942 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cldn5O54942 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Gm7506-201ENSMUST00000207758 815 ntBASIC16.81■□□□□ 0.28
Cldn5O54942 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn5O54942 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cldn5O54942 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn5O54942 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cldn5O54942 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.81■□□□□ 0.28
Cldn5O54942 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cldn5O54942 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldn5O54942 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.81■□□□□ 0.28
Cldn5O54942 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Cldn5O54942 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cldn5O54942 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.8■□□□□ 0.28
Cldn5O54942 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cldn5O54942 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms