Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Phox2bO35690 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Phox2bO35690 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Phox2bO35690 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.29■□□□□ 0.2
Phox2bO35690 Gm11424-201ENSMUST00000121929 829 ntBASIC16.29■□□□□ 0.2
Phox2bO35690 Gm4535-201ENSMUST00000182274 558 ntBASIC16.29■□□□□ 0.2
Phox2bO35690 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Phox2bO35690 Thoc7-209ENSMUST00000225325 765 ntBASIC16.29■□□□□ 0.2
Phox2bO35690 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Gm10355-201ENSMUST00000097146 517 ntBASIC16.29■□□□□ 0.2
Phox2bO35690 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.29■□□□□ 0.2
Phox2bO35690 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Phox2bO35690 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Phox2bO35690 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.28■□□□□ 0.2
Phox2bO35690 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.28■□□□□ 0.2
Phox2bO35690 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.28■□□□□ 0.2
Phox2bO35690 Gm11025-201ENSMUST00000140773 466 ntBASIC16.28■□□□□ 0.2
Phox2bO35690 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.28■□□□□ 0.2
Phox2bO35690 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.28■□□□□ 0.2
Phox2bO35690 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Phox2bO35690 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Phox2bO35690 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Phox2bO35690 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Phox2bO35690 Gm13616-201ENSMUST00000120600 222 ntBASIC16.27■□□□□ 0.2
Phox2bO35690 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.27■□□□□ 0.2
Phox2bO35690 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.27■□□□□ 0.2
Phox2bO35690 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.27■□□□□ 0.2
Phox2bO35690 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.27■□□□□ 0.2
Phox2bO35690 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.27■□□□□ 0.2
Phox2bO35690 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Phox2bO35690 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.27■□□□□ 0.19
Phox2bO35690 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Phox2bO35690 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.26■□□□□ 0.19
Phox2bO35690 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Phox2bO35690 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.26■□□□□ 0.19
Phox2bO35690 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.26■□□□□ 0.19
Phox2bO35690 Gm8396-201ENSMUST00000057361 823 ntBASIC16.26■□□□□ 0.19
Phox2bO35690 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Phox2bO35690 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Phox2bO35690 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Phox2bO35690 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Phox2bO35690 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms