Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scamp3O35609 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scamp3O35609 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scamp3O35609 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Scamp3O35609 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.17■□□□□ 0.18
Scamp3O35609 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scamp3O35609 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Scamp3O35609 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.16■□□□□ 0.18
Scamp3O35609 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scamp3O35609 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scamp3O35609 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scamp3O35609 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scamp3O35609 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.16■□□□□ 0.18
Scamp3O35609 Gm18669-201ENSMUST00000216049 778 ntBASIC16.16■□□□□ 0.18
Scamp3O35609 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.16■□□□□ 0.18
Scamp3O35609 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scamp3O35609 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scamp3O35609 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Scamp3O35609 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.15■□□□□ 0.18
Scamp3O35609 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scamp3O35609 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.15■□□□□ 0.18
Scamp3O35609 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.15■□□□□ 0.18
Scamp3O35609 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.15■□□□□ 0.18
Scamp3O35609 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.15■□□□□ 0.18
Scamp3O35609 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scamp3O35609 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Scamp3O35609 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.14■□□□□ 0.17
Scamp3O35609 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Scamp3O35609 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Scamp3O35609 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.14■□□□□ 0.17
Scamp3O35609 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Scamp3O35609 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Scamp3O35609 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Scamp3O35609 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Gm17971-201ENSMUST00000190239 806 ntBASIC16.14■□□□□ 0.17
Scamp3O35609 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scamp3O35609 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scamp3O35609 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms