Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.13□□□□□ -0.15
Atf6bO35451 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Atf6bO35451 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Gm6345-202ENSMUST00000180900 204 ntBASIC14.13□□□□□ -0.15
Atf6bO35451 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.13□□□□□ -0.15
Atf6bO35451 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Atf6bO35451 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Atf6bO35451 Gm11336-201ENSMUST00000118168 334 ntBASIC14.12□□□□□ -0.15
Atf6bO35451 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Atf6bO35451 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.12□□□□□ -0.15
Atf6bO35451 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.12□□□□□ -0.15
Atf6bO35451 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Atf6bO35451 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Atf6bO35451 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.12□□□□□ -0.15
Atf6bO35451 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atf6bO35451 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.11□□□□□ -0.15
Atf6bO35451 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atf6bO35451 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.11□□□□□ -0.15
Atf6bO35451 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atf6bO35451 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.11□□□□□ -0.15
Atf6bO35451 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.11□□□□□ -0.15
Atf6bO35451 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.11□□□□□ -0.15
Atf6bO35451 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.11□□□□□ -0.15
Atf6bO35451 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Atf6bO35451 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf6bO35451 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms