Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Gm42642-201ENSMUST00000200683 355 ntBASIC13.8□□□□□ -0.2
Prrt1O35449 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prrt1O35449 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Gm4968-201ENSMUST00000071458 858 ntBASIC13.8□□□□□ -0.2
Prrt1O35449 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.8□□□□□ -0.2
Prrt1O35449 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.8□□□□□ -0.2
Prrt1O35449 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Prrt1O35449 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prrt1O35449 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.79□□□□□ -0.2
Prrt1O35449 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.79□□□□□ -0.2
Prrt1O35449 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.79□□□□□ -0.2
Prrt1O35449 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.79□□□□□ -0.2
Prrt1O35449 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.79□□□□□ -0.2
Prrt1O35449 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prrt1O35449 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.78□□□□□ -0.2
Prrt1O35449 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.78□□□□□ -0.2
Prrt1O35449 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.78□□□□□ -0.2
Prrt1O35449 Sybu-209ENSMUST00000228639 4113 ntBASIC13.78□□□□□ -0.2
Prrt1O35449 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Prrt1O35449 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.78□□□□□ -0.2
Prrt1O35449 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Prrt1O35449 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prrt1O35449 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prrt1O35449 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.78□□□□□ -0.2
Prrt1O35449 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prrt1O35449 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Prrt1O35449 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prrt1O35449 Gm27000-201ENSMUST00000182943 842 ntBASIC13.77□□□□□ -0.21
Prrt1O35449 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms