Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.03□□□□□ -0.16
Gfra3O35118 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Gfra3O35118 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.03□□□□□ -0.16
Gfra3O35118 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.03□□□□□ -0.16
Gfra3O35118 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra3O35118 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Gfra3O35118 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.02□□□□□ -0.16
Gfra3O35118 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.02□□□□□ -0.16
Gfra3O35118 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Gfra3O35118 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gfra3O35118 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.02□□□□□ -0.16
Gfra3O35118 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Gfra3O35118 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Gfra3O35118 Gm7153-201ENSMUST00000117092 455 ntBASIC14.02□□□□□ -0.17
Gfra3O35118 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.02□□□□□ -0.17
Gfra3O35118 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
Gfra3O35118 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.02□□□□□ -0.17
Gfra3O35118 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.02□□□□□ -0.17
Gfra3O35118 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Gfra3O35118 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.02□□□□□ -0.17
Gfra3O35118 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Gfra3O35118 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.01□□□□□ -0.17
Gfra3O35118 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Gfra3O35118 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Gm24589-201ENSMUST00000116692 94 ntBASIC14.01□□□□□ -0.17
Gfra3O35118 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.01□□□□□ -0.17
Gfra3O35118 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gfra3O35118 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Gm9889-202ENSMUST00000206983 1577 ntBASIC14□□□□□ -0.17
Gfra3O35118 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gfra3O35118 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gfra3O35118 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Gfra3O35118 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14□□□□□ -0.17
Gfra3O35118 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14□□□□□ -0.17
Gfra3O35118 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Gfra3O35118 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14□□□□□ -0.17
Gfra3O35118 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gfra3O35118 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gfra3O35118 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms