Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm7367-201ENSMUST00000057611 492 ntBASIC15.51■□□□□ 0.07
Sh3yl1O08641 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3yl1O08641 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Gm11336-201ENSMUST00000118168 334 ntBASIC15.5■□□□□ 0.07
Sh3yl1O08641 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.5■□□□□ 0.07
Sh3yl1O08641 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh3yl1O08641 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Mir770-201ENSMUST00000103252 94 ntBASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm29518-201ENSMUST00000190858 372 ntBASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm33142-201ENSMUST00000193913 867 ntBASIC15.49■□□□□ 0.07
Sh3yl1O08641 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3yl1O08641 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.49■□□□□ 0.07
Sh3yl1O08641 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Gm21362-201ENSMUST00000194272 928 ntBASIC15.48■□□□□ 0.07
Sh3yl1O08641 Gm17808-201ENSMUST00000200859 894 ntBASIC15.48■□□□□ 0.07
Sh3yl1O08641 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.48■□□□□ 0.07
Sh3yl1O08641 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.48■□□□□ 0.07
Sh3yl1O08641 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3yl1O08641 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms