Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.4■□□□□ 0.38
Usp35M0QWN7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.4■□□□□ 0.38
Usp35M0QWN7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.4■□□□□ 0.38
Usp35M0QWN7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Usp35M0QWN7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp35M0QWN7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp35M0QWN7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Gm34391-201ENSMUST00000203706 907 ntBASIC17.38■□□□□ 0.37
Usp35M0QWN7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp35M0QWN7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp35M0QWN7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms