Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Gm10566-201ENSMUST00000086739 996 ntBASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh9F8VPK8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh9F8VPK8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gm7889-201ENSMUST00000185591 958 ntBASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Pcdh9F8VPK8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdh9F8VPK8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdh9F8VPK8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdh9F8VPK8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdh9F8VPK8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.64■□□□□ 0.26
Pcdh9F8VPK8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh9F8VPK8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh9F8VPK8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms