Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdh11xF6ZNL5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdh11xF6ZNL5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdh11xF6ZNL5 Mir770-201ENSMUST00000103252 94 ntBASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Gm7284-201ENSMUST00000131667 944 ntBASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdh11xF6ZNL5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Gm44430-201ENSMUST00000203376 995 ntBASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdh11xF6ZNL5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Gm29518-201ENSMUST00000190858 372 ntBASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Pcdh11xF6ZNL5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Pcdh11xF6ZNL5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms