Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm7488-201ENSMUST00000117148 684 ntBASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Gm27306-201ENSMUST00000183970 107 ntBASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Mir8102-201ENSMUST00000184148 139 ntBASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Gm9682-201ENSMUST00000197505 556 ntBASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Gm7730-201ENSMUST00000212486 454 ntBASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc188F6WEU2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccdc188F6WEU2 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Syt7-205ENSMUST00000224135 1557 ntBASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Gm17837-201ENSMUST00000186435 985 ntBASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc188F6WEU2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Rpph1-201ENSMUST00000175096 319 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm4518-201ENSMUST00000182638 718 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm44855-201ENSMUST00000205725 362 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm9899-201ENSMUST00000065519 555 ntBASIC16.35■□□□□ 0.21
Ccdc188F6WEU2 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms