Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ube4aE9Q735 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.48■□□□□ 0.71
Ube4aE9Q735 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.48■□□□□ 0.71
Ube4aE9Q735 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.48■□□□□ 0.71
Ube4aE9Q735 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Gm5264-201ENSMUST00000190584 848 ntBASIC19.47■□□□□ 0.71
Ube4aE9Q735 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.47■□□□□ 0.71
Ube4aE9Q735 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ube4aE9Q735 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.46■□□□□ 0.71
Ube4aE9Q735 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.46■□□□□ 0.71
Ube4aE9Q735 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.46■□□□□ 0.71
Ube4aE9Q735 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ube4aE9Q735 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Gm14140-201ENSMUST00000119999 995 ntBASIC19.45■□□□□ 0.7
Ube4aE9Q735 Gm15467-201ENSMUST00000120582 445 ntBASIC19.45■□□□□ 0.7
Ube4aE9Q735 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.45■□□□□ 0.7
Ube4aE9Q735 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.45■□□□□ 0.7
Ube4aE9Q735 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.45■□□□□ 0.7
Ube4aE9Q735 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ube4aE9Q735 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Gm27646-201ENSMUST00000183989 110 ntBASIC19.44■□□□□ 0.7
Ube4aE9Q735 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ube4aE9Q735 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ube4aE9Q735 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms