Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb9E9Q5G2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.08■□□□□ 0.65
Pcdhb9E9Q5G2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Gm25745-201ENSMUST00000174945 133 ntBASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhb9E9Q5G2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Gm43347-201ENSMUST00000200226 580 ntBASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb9E9Q5G2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb9E9Q5G2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.05■□□□□ 0.64
Pcdhb9E9Q5G2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb9E9Q5G2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb9E9Q5G2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb9E9Q5G2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb9E9Q5G2 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.04■□□□□ 0.64
Pcdhb9E9Q5G2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms