Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cpsf4lE9Q2N0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cpsf4lE9Q2N0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cpsf4lE9Q2N0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Gm7284-201ENSMUST00000131667 944 ntBASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Gm27704-201ENSMUST00000185094 107 ntBASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cpsf4lE9Q2N0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Olfr129-201ENSMUST00000122318 993 ntBASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Gm27742-201ENSMUST00000184667 60 ntBASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf4lE9Q2N0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf4lE9Q2N0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms