Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cntnap3E9PY62 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cntnap3E9PY62 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Gm22175-201ENSMUST00000175007 78 ntBASIC17.82■□□□□ 0.44
Cntnap3E9PY62 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cntnap3E9PY62 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Gm27622-201ENSMUST00000183779 60 ntBASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cntnap3E9PY62 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cntnap3E9PY62 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Gm8825-201ENSMUST00000182565 998 ntBASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cntnap3E9PY62 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Gm4899-201ENSMUST00000178708 719 ntBASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cntnap3E9PY62 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms