Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.51□□□□□ -0.09
Shank1D3YZU1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.51□□□□□ -0.09
Shank1D3YZU1 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.51□□□□□ -0.09
Shank1D3YZU1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gm15920-201ENSMUST00000118998 402 ntBASIC14.5□□□□□ -0.09
Shank1D3YZU1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.5□□□□□ -0.09
Shank1D3YZU1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.5□□□□□ -0.09
Shank1D3YZU1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shank1D3YZU1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Gm14701-201ENSMUST00000117156 348 ntBASIC14.49□□□□□ -0.09
Shank1D3YZU1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.49□□□□□ -0.09
Shank1D3YZU1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.49□□□□□ -0.09
Shank1D3YZU1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shank1D3YZU1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.48□□□□□ -0.09
Shank1D3YZU1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.48□□□□□ -0.09
Shank1D3YZU1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Shank1D3YZU1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms