Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Trim30cD3YVI9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim30cD3YVI9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim30cD3YVI9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim30cD3YVI9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim30cD3YVI9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim30cD3YVI9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim30cD3YVI9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim30cD3YVI9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim30cD3YVI9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms