Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Syce3B5KM66 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.67■□□□□ 0.58
Syce3B5KM66 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.67■□□□□ 0.58
Syce3B5KM66 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Syce3B5KM66 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.67■□□□□ 0.58
Syce3B5KM66 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Syce3B5KM66 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.66■□□□□ 0.58
Syce3B5KM66 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Syce3B5KM66 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Syce3B5KM66 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Syce3B5KM66 Gm9731-201ENSMUST00000209480 747 ntBASIC18.66■□□□□ 0.58
Syce3B5KM66 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Syce3B5KM66 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Syce3B5KM66 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Syce3B5KM66 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.65■□□□□ 0.58
Syce3B5KM66 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Syce3B5KM66 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Syce3B5KM66 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.65■□□□□ 0.58
Syce3B5KM66 Gm27275-201ENSMUST00000184318 272 ntBASIC18.65■□□□□ 0.58
Syce3B5KM66 Gm43183-201ENSMUST00000200632 547 ntBASIC18.65■□□□□ 0.58
Syce3B5KM66 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Syce3B5KM66 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syce3B5KM66 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syce3B5KM66 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Syce3B5KM66 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.64■□□□□ 0.57
Syce3B5KM66 Gm18284-201ENSMUST00000172604 624 ntBASIC18.64■□□□□ 0.57
Syce3B5KM66 Gm27405-201ENSMUST00000184201 112 ntBASIC18.64■□□□□ 0.57
Syce3B5KM66 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.64■□□□□ 0.57
Syce3B5KM66 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Syce3B5KM66 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Syce3B5KM66 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Syce3B5KM66 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Syce3B5KM66 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Syce3B5KM66 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Syce3B5KM66 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Syce3B5KM66 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms