Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm42545-201ENSMUST00000202755 922 ntBASIC13.21□□□□□ -0.29
Gm12887B1AVM1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gm12887B1AVM1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gm12887B1AVM1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Gm12887B1AVM1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Gm37025-201ENSMUST00000195159 829 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Gm18025-201ENSMUST00000221733 862 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Gm5874-201ENSMUST00000096101 508 ntBASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm12887B1AVM1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm12887B1AVM1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Sybu-209ENSMUST00000228639 4113 ntBASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Gm12382-201ENSMUST00000122005 922 ntBASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm12887B1AVM1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms