Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hbb-bsA8DUK4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.51□□□□□ -0.57
Hbb-bsA8DUK4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 App-207ENSMUST00000227737 2827 ntBASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hbb-bsA8DUK4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-bsA8DUK4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-bsA8DUK4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-bsA8DUK4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hbb-bsA8DUK4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hbb-bsA8DUK4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms