Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Gm2213-201ENSMUST00000197485 688 ntBASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Gm8000-201ENSMUST00000188378 592 ntBASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
Sh2d4bA6X942 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d4bA6X942 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Gm6376-201ENSMUST00000209407 580 ntBASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d4bA6X942 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Sh2d4bA6X942 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Rprl3-201ENSMUST00000157400 290 ntBASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d4bA6X942 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms