Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
IsxA1A546 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
IsxA1A546 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
IsxA1A546 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IsxA1A546 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.16■□□□□ 0.02
IsxA1A546 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
IsxA1A546 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
IsxA1A546 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.16■□□□□ 0.02
IsxA1A546 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
IsxA1A546 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
IsxA1A546 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
IsxA1A546 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.16■□□□□ 0.02
IsxA1A546 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IsxA1A546 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.16■□□□□ 0.02
IsxA1A546 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IsxA1A546 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.15■□□□□ 0.02
IsxA1A546 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IsxA1A546 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.15■□□□□ 0.02
IsxA1A546 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IsxA1A546 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IsxA1A546 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IsxA1A546 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IsxA1A546 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IsxA1A546 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.14■□□□□ 0.01
IsxA1A546 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.14■□□□□ 0.01
IsxA1A546 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IsxA1A546 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.14■□□□□ 0.01
IsxA1A546 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IsxA1A546 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
IsxA1A546 Gm10653-202ENSMUST00000139570 835 ntBASIC15.14■□□□□ 0.01
IsxA1A546 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IsxA1A546 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms